We propose a new method to build persistent suffix trees for indexing the genomic data. Our algorithm DiGeST (Disk-Based Genomic Suffix Tree) improves significantly over previous ...
Marina Barsky, Ulrike Stege, Alex Thomo, Chris Upt...
Graphs are a natural foundation for genome map databases. Mapping and other genomic data can be clearly represented by graphs, and graphs can be stored in a database. Graphs are d...
Mark Graves, Ellen R. Bergeman, Charles B. Lawrenc...
As the eXtensible Markup Language (XML) becomes a popular or standard language for exchanging data over the Internet/Web, there are a growing number of genome Web sites that make ...
Kei-Hoi Cheung, Yang Liu, Anuj Kumar, Michael Snyd...
Recent years have seen dramatic and sustained growth in the amount of genomic data being generated, including in late 1999 the first complete sequence of a human chromosome. The c...
Kevin Bryson, Michael Luck, Mike Joy, David T. Jon...
While genomic sequencing projects have proved an abundant source of information for biological studies ranging from the molecular to the ecological in scale, much of the informati...
Douglas W. Raiford, Dan E. Krane, Travis E. Doom, ...