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IJBRA
2007
56views more  IJBRA 2007»
13 years 11 months ago
Molecular coevolution of the vertebrate cytochrome c
Kimberly K. Baer, David A. McClellan
IJBRA
2007
52views more  IJBRA 2007»
13 years 11 months ago
Proteomic data mining using predicted peptide chromatographic retention times
Brian Tripet, Megha Renuka Jayadev, Don Blow, Cao ...
IJBRA
2007
103views more  IJBRA 2007»
13 years 11 months ago
A pragmatic approach to mapping the open biomedical ontologies
: A large number of ontologies have been introduced by the biomedical community in recent years. From an application perspective, identifying related ontologies and linking them to...
Deendayal Dinakarpandian, Tuanjie Tong, Yugyung Le...
IJBRA
2007
114views more  IJBRA 2007»
13 years 11 months ago
Enhanced semantic access to the protein engineering literature using ontologies populated by text mining
: The biomedical literature is growing at an ever-increasing rate, which pronounces the need to support scientists with advanced, automated means of accessing knowledge. We investi...
René Witte, Thomas Kappler, Christopher J. ...
IJBRA
2007
89views more  IJBRA 2007»
13 years 11 months ago
Conservative adjustment of permutation p-values when the number of permutations is limited
The permutation procedure is widely used to assess the significance level (p-value) of a test statistic. This approach is asymptotically consistent. In genomics and proteomics st...
Yinglei Lai
IJBRA
2007
95views more  IJBRA 2007»
13 years 11 months ago
A novel stationary wavelet denoising algorithm for array-based DNA Copy Number data
Abstract: High-throughput array-based assays have recently been developed to detect DNA copy number (DCN) aberrations. The DCN data from these arrays is characterized by high level...
Yuhang Wang, Siling Wang
IJBRA
2007
116views more  IJBRA 2007»
13 years 11 months ago
Biomedical ontology improves biomedical literature clustering performance: a comparison study
: Document clustering has been used for better document retrieval and text mining. In this paper, we investigate if a biomedical ontology improves biomedical literature clustering ...
Illhoi Yoo, Xiaohua Hu, Il-Yeol Song
IJBRA
2007
120views more  IJBRA 2007»
13 years 11 months ago
The myGrid ontology: bioinformatics service discovery
: In this paper we explore issues in the development of the my Grid ontology, which is an OWL ontology designed to support service discovery through service annotation. There are c...
Katy Wolstencroft, Pinar Alper, Duncan Hull, Chris...
IJBRA
2007
84views more  IJBRA 2007»
13 years 11 months ago
Is the protein folding an aim-oriented process? Human haemoglobin as example
: The model for protein folding (in silico) simulation is presented. Three steps have been implemented: • early stage folding based on the backbone conformation • hydrophobic c...
Michal Brylinski, Leszek Konieczny, Irena Roterman
IJBRA
2007
57views more  IJBRA 2007»
13 years 11 months ago
Decoding algorithms in pooling designs with inhibitors and error-tolerance
: Pooling designs are used in DNA library screening to efficiently distinguish positive from negative clones, which is fundamental for studying gene functions and many other biolog...
My T. Thai, David MacCallum, Ping Deng, Weili Wu