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IPPS
2006
IEEE
14 years 6 months ago
Parallel multiple sequence alignment with local phylogeny search by simulated annealing
The problem of multiple sequence alignment is one of the most important problems in computational biology. In this paper we present a new method that simultaneously performs multi...
Jaroslaw Zola, Denis Trystram, Andrei Tchernykh, C...
IPPS
2006
IEEE
14 years 6 months ago
An entropy-based algorithm for time-driven software instrumentation in parallel systems
While monitoring, instrumented long running parallel applications generate huge amount of instrumentation data. Processing and storing this data incurs overhead, and perturbs the ...
A. Ozmen
IPPS
2006
IEEE
14 years 6 months ago
Online strategies for high-performance power-aware thread execution on emerging multiprocessors
Granularity control is an effective means for trading power consumption with performance on dense shared memory multiprocessors, such as multi-SMT and multi-CMP systems. In this p...
Matthew Curtis-Maury, James Dzierwa, Christos D. A...
IPPS
2006
IEEE
14 years 6 months ago
Web server protection by customized instruction set encoding
We present a novel technique to secure the execution of a processor against the execution of malicious code (trojans, viruses). The main idea is to permute parts of the opcode val...
Bernhard Fechner, Jörg Keller, Andreas Wohlfe...
IPPS
2006
IEEE
14 years 6 months ago
A case for exploit-robust and attack-aware protocol RFCs
A large number of vulnerabilities occur because protocol implementations failed to anticipate illegal packets. rfcs typically define what constitute “right” packets relevant ...
Venkat Pothamsetty, Prabhaker Mateti
IPPS
2006
IEEE
14 years 6 months ago
Non-cooperative, semi-cooperative, and cooperative games-based grid resource allocation
In this paper we consider, compare and analyze three game theoretical Grid resource allocation mechanisms. Namely, 1) the non-cooperative sealed-bid method where tasks are auction...
Samee Ullah Khan, Ishfaq Ahmad
IPPS
2006
IEEE
14 years 6 months ago
Network intrusion detection with semantics-aware capability
Malicious network traffic, including widespread worm activity, is a growing threat to Internet-connected networks and hosts. In this paper, we propose a network intrusion detectio...
Walter J. Scheirer, Mooi Choo Chuah
IPPS
2006
IEEE
14 years 6 months ago
Design flow for optimizing performance in processor systems with on-chip coarse-grain reconfigurable logic
A design flow for processor platforms with on-chip coarse-grain reconfigurable logic is presented. The reconfigurable logic is realized by a 2-Dimensional Array of Processing Elem...
Michalis D. Galanis, Grigoris Dimitroulakos, Const...
IPPS
2006
IEEE
14 years 6 months ago
Effecting parallel graph eigensolvers through library composition
— Many interesting problems in graph theory can be reduced to solving an eigenproblem of the adjacency matrix or Laplacian of a graph. Given the availability of high-quality line...
A. Breuer, Peter Gottschling, Douglas Gregor, Andr...