Design templates that involve discovery, analysis, and integration of information resources commonly occur in many scientific research projects. In this paper we present examples o...
Joel H. Saltz, Scott Oster, Shannon Hastings, Step...
Despite the computing power of emerging technologies, predicting long RNA secondary structures with thermodynamics-based methods is still infeasible, especially if the structures ...
Michela Taufer, Thamar Solorio, Abel Licon, David ...
Suitability of the next generation of high-performance computing systems for petascale simulations will depend on a balance between factors such as processor performance, memory p...
Subhash Saini, Dennis C. Jespersen, Dale Talcott, ...
This paper develops a plug-and-play reusable LogGP model that can be used to predict the runtime and scaling behavior of different MPI-based pipelined wavefront applications runni...
Gihan R. Mudalige, Mary K. Vernon, Stephen A. Jarv...
Many of the optimization problems from the real world are multiobjective in nature, and the reference algorithm for multiobjective optimization is NSGA-II. Frequently, these probl...
MPI Alltoall is one of the most communication intense collective operation used in many parallel applications. Recently, the supercomputing arena has witnessed phenomenal growth o...
Rahul Kumar, Amith R. Mamidala, Dhabaleswar K. Pan...
We introduce a generic framework for the distributed execution of combinatorial optimization tasks. Instead of relying on custom hardware (like dedicated parallel machines or clus...