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JCC
2007
76views more  JCC 2007»
13 years 11 months ago
Valence bond theory for chemical dynamics
: This essay provides a perspective on several issues in valence bond theory: the physical significance of semilocal bonding orbitals, the capability of valence bond concepts to e...
Donald G. Truhlar
JCC
2007
60views more  JCC 2007»
13 years 11 months ago
Correlated ab initio quantum chemical calculations of di- and trisaccharide conformations
Ian R. Gould, Hoda Abdel-Aal Bettley, Richard A. B...
JCC
2007
59views more  JCC 2007»
13 years 11 months ago
Accelerating molecular modeling applications with graphics processors
John E. Stone, James C. Phillips, Peter L. Freddol...
JCC
2007
121views more  JCC 2007»
13 years 11 months ago
Speeding up parallel GROMACS on high-latency networks
: We investigate the parallel scaling of the GROMACS molecular dynamics code on Ethernet Beowulf clusters and what prerequisites are necessary for decent scaling even on such clust...
Carsten Kutzner, David van der Spoel, Martin Fechn...
JCC
2007
79views more  JCC 2007»
13 years 11 months ago
Interfacing Q-Chem and CHARMM to perform QM/MM reaction path calculations
Abstract: A hybrid quantum mechanical/molecular mechanical (QM/MM) potential energy function with HartreeFock, density functional theory (DFT), and post-HF (RIMP2, MP2, CCSD) capab...
H. Lee Woodcock III, Milan Hodoscek, Andrew T. B. ...
JCC
2007
127views more  JCC 2007»
13 years 11 months ago
Prediction of GFP spectral properties using artificial neural network
Abstract: In this study, we applied artificial neural network, implementing the backpropagation algorithm, for the prediction of the excitation and emission maxima of green fluores...
Chanin Nantasenamat, Chartchalerm Isarankura-Na-Ay...