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    2003
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    105views Applied Computing» more  SC 2003»
    A Million-Fold Speed Improvement in Genomic Repeats Detection
    14 years 6 months ago
    A Million-Fold Speed Improvement in Genomic Repeats Detection
    Download  www.sc-conference.org
    This paper presents a novel, parallel algorithm for generating top alignments. Top alignments are used for finding internal repeats in biological sequences like proteins and gene...
    John W. Romein, Jaap Heringa, Henri E. Bal
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    2003
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    93views Applied Computing» more  SC 2003»
    Parallel Particle-In-Cell Simulation of Colliding Beams in High Energy Accelerators
    14 years 6 months ago
    Parallel Particle-In-Cell Simulation of Colliding Beams in High Energy Accelerators
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    Ji Qiang, Miguel A. Furman, Robert D. Ryne
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    2003
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    133views Applied Computing» more  SC 2003»
    Enabling the Efficient Use of SMP Clusters: The GAMESS/DDI Model
    14 years 6 months ago
    Enabling the Efficient Use of SMP Clusters: The GAMESS/DDI Model
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    Ryan M. Olson, Michael W. Schmidt, Mark S. Gordon,...
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    2003
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    86views Applied Computing» more  SC 2003»
    Evaluation of Cache-based Superscalar and Cacheless Vector Architectures for Scientific Computations
    14 years 6 months ago
    Evaluation of Cache-based Superscalar and Cacheless Vector Architectures for Scientific Computations
    Download  crd.lbl.gov
    Leonid Oliker, Andrew Canning, Jonathan Carter, Jo...
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    2003
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    113views Applied Computing» more  SC 2003»
    Quantifying and Improving the Availability of High-Performance Cluster-Based Internet Services
    14 years 6 months ago
    Quantifying and Improving the Availability of High-Performance Cluster-Based Internet Services
    Download  vivo.cs.rutgers.edu
    Cluster-based servers can substantially increase performance when nodes cooperate to globally manage resources. However, in this paper we show that cooperation results in a substa...
    Kiran Nagaraja, Neeraj Krishnan, Ricardo Bianchini...
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    2003
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    91views Applied Computing» more  SC 2003»
    Scalable NIC-based Reduction on Large-scale Clusters
    14 years 6 months ago
    Scalable NIC-based Reduction on Large-scale Clusters
    Download  www.ccs3.lanl.gov
    Adam Moody, Juan Fernández, Fabrizio Petrin...
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    2003
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    152views Applied Computing» more  SC 2003»
    Identifying and Exploiting Spatial Regularity in Data Memory References
    14 years 6 months ago
    Identifying and Exploiting Spatial Regularity in Data Memory References
    Download  www.csl.cornell.edu
    The growing processor/memory performance gap causes the performance of many codes to be limited by memory accesses. If known to exist in an application, strided memory accesses fo...
    Tushar Mohan, Bronis R. de Supinski, Sally A. McKe...
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    2003
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    95views Applied Computing» more  SC 2003»
    Performance evaluation and tuning of GRAPE-6 - towards 40 "real" Tflops
    14 years 6 months ago
    Performance evaluation and tuning of GRAPE-6 - towards 40 "real" Tflops
    Download  www.sc-conference.org
    Junichiro Makino, Eiichiro Kokubo, Toshiyuki Fukus...
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    2003
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    110views Applied Computing» more  SC 2003»
    Visualizing Very Large-Scale Earthquake Simulations
    14 years 6 months ago
    Visualizing Very Large-Scale Earthquake Simulations
    Download  www.cs.ucdavis.edu
    Kwan-Liu Ma, Aleksander Stompel, Jacobo Bielak, Om...
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    2003
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    107views Applied Computing» more  SC 2003»
    Traffic-based Load Balance for Scalable Network Emulation
    14 years 6 months ago
    Traffic-based Load Balance for Scalable Network Emulation
    Download  www-csag.ucsd.edu
    Load balance is critical to achieving scalability for large network emulation studies, which are of compelling interest for emerging Grid, Peer to Peer, and other distributed appl...
    Xin Liu, Andrew A. Chien
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