ENTCS
2008
13 years 11 months ago
2008
In this paper we present a stochastic semantics for Bigraphical Reactive Systems. A reduction and a labelled stochastic semantics for bigraphs are defined. As a sanity check, we p...
FMSB
2008
14 years 1 months ago
2008
Rule-based modelling is particularly effective for handling the highly combinatorial aspects of cellular signalling. The dynamics is described in terms of interactions between part...
ICLP
2010
Springer
14 years 3 months ago
2010
Springer
[6]. An SBML model can be interpreted in Biocham at three abstraction levels: • the Boolean semantics (asynchronuous Boolean state transitions on the presence/absence of molecule...
PACT
2007
Springer
14 years 5 months ago
2007
Springer
We consider BioAmbients, a calculus for specifying biological entities and for simulating and analysing their behaviour. We extend BioAmbients to take quantitative information into...