ENTCS
2008
13 years 7 months ago
2008
In this paper we present a stochastic semantics for Bigraphical Reactive Systems. A reduction and a labelled stochastic semantics for bigraphs are defined. As a sanity check, we p...
FMSB
2008
13 years 9 months ago
2008
Rule-based modelling is particularly effective for handling the highly combinatorial aspects of cellular signalling. The dynamics is described in terms of interactions between part...
ICLP
2010
Springer
13 years 11 months ago
2010
Springer
[6]. An SBML model can be interpreted in Biocham at three abstraction levels: • the Boolean semantics (asynchronuous Boolean state transitions on the presence/absence of molecule...
PACT
2007
Springer
14 years 1 months ago
2007
Springer
We consider BioAmbients, a calculus for specifying biological entities and for simulating and analysing their behaviour. We extend BioAmbients to take quantitative information into...