Abstract. Simple families of increasing trees can be constructed from simply generated tree families, if one considers for every tree of size n all its increasing labellings, i.e.,...
Given a species tree and a gene tree, a valid coalescent history is a list of the branches of the species tree on which coalescences in the gene tree take place. I develop a recur...
We study a new data mining problem concerning the discovery of frequent agreement subtrees (FASTs) from a set of phylogenetic trees. A phylogenetic tree, or phylogeny, is an unorde...
A fundamental task in evolutionary biology is the amalgamation of a collection P of leaf-labelled trees into a single parent tree. A desirable feature of any such amalgamation is ...
Katharina T. Huber, Vincent Moulton, Charles Sempl...
We study random cutting down of a rooted tree and show that the number of cuts is equal (in distribution) to the number of records in the tree when edges (or vertices) are assigned...
Abstract. This paper describes an example-based machine translation (EBMT) method based on tree-string correspondence (TSC) and statistical generation. In this method, the translat...
Phylogenetic analyses are central to many research areas in biology and typically involve the identification of homologous sequences, their multiple alignment, the phylogenetic re...
This paper describes a prototypical system that combines several aspects of engagement as defined in (Naps et al. 2003) for the topic of tree and tree algorithm animations.
A k-decomposition of a tree is a process in which the tree is recursively partitioned into k edge-disjoint subtrees until each subtree contains only one edge. We investigated the p...
We study the problem of uniformly partitioning the edge set of a tree with n edges into k connected components, where k ≤ n. The objective is to minimize the ratio of the maximu...
Bang Ye Wu, Hung-Lung Wang, Shih Ta Kuan, Kun-Mao ...