CPM 2007 - PDF Preprint Papers

CPM 2007 Combinatorial Pattern Matching

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CPM
2007
Springer

222views Combinatorics» more CPM 2007»

Computing Exact p-Value for Structured Motif

14 years 5 months ago

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Extracting motifs from a set of DNA sequences is important in computational biology. Occurrence probability is a common used statistics to evaluate the statistical signiﬁcance of...

Jing Zhang, Xi Chen, Ming Li

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Id	Views	Title	Status

1	222	Computing Exact p-Value for Structured Motif	claim
2	185	Algorithms for Computing the Longest Parameterized Common Subsequence	claim
3	167	Deterministic Length Reduction: Fast Convolution in Sparse Data and Applications	claim
4	135	Compressed Text Indexes with Fast Locate	claim
5	134	Efficient Computation of Substring Equivalence Classes with Suffix Arrays	claim
6	129	Improved Approximate String Matching and Regular Expression Matching on Ziv-Lempel Compressed Texts	claim
7	124	Cache-Oblivious Index for Approximate String Matching	claim
8	115	Two-Dimensional Range Minimum Queries	claim
9	102	Improved Sketching of Hamming Distance with Error Correcting	claim
10	102	Non-breaking Similarity of Genomes with Gene Repetitions	claim
11	101	Improved Algorithms for Inferring the Minimum Mosaic of a Set of Recombinants	claim
12	100	Suffix Arrays on Words	claim
13	99	Speeding Up HMM Decoding and Training by Exploiting Sequence Repetitions	claim
14	98	Processing Compressed Texts: A Tractability Border	claim
15	98	Space-Efficient Algorithms for Document Retrieval	claim
16	94	Finding Witnesses by Peeling	claim
17	90	A Lempel-Ziv Text Index on Secondary Storage	claim
18	88	A New and Faster Method of Sorting by Transpositions	claim
19	85	Self-normalised Distance with Don't Cares	claim
20	84	Tiling Periodicity	claim
21	83	Longest Common Separable Pattern Among Permutations	claim
22	78	Common Structured Patterns in Linear Graphs: Approximation and Combinatorics	claim
23	74	Fixed-Parameter Tractability of the Maximum Agreement Supertree Problem	claim
24	73	Move-to-Front, Distance Coding, and Inversion Frequencies Revisited	claim

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