RECOMB 2009 - PDF Preprint Papers

RECOMB 2009 Annual Conference on Research in Computational Molecular Biology

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RECOMB
2009
Springer

266views Computational Biology» more RECOMB 2009»

COE: A General Approach for Efficient Genome-Wide Two-Locus Epistasis Test in Disease Association Study

15 years 1 months ago

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The availability of high density single nucleotide polymorphisms (SNPs) data has made genome-wide association study computationally challenging. Twolocus epistasis (gene-gene inter...

Xiang Zhang, Feng Pan, Yuying Xie, Fei Zou, Wei Wa...

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Id	Views	Title	Status

1	266	COE: A General Approach for Efficient Genome-Wide Two-Locus Epistasis Test in Disease Association Study	claim
2	214	Learning Models for Aligning Protein Sequences with Predicted Secondary Structure	claim
3	201	Spatial Clustering of Multivariate Genomic and Epigenomic Information	claim
4	193	Simultaneous Alignment and Folding of Protein Sequences	claim
5	183	Detection of Locally Over-Represented GO Terms in Protein-Protein Interaction Networks	claim
6	179	Haplotype Inference in Complex Pedigrees	claim
7	163	Parameter Synthesis in Nonlinear Dynamical Systems: Application to Systems Biology	claim
8	162	A Robust Bayesian Two-Sample Test for Detecting Intervals of Differential Gene Expression in Microarray Time Series	claim
9	159	Counting All DCJ Sorting Scenarios	claim
10	153	Finding Biologically Accurate Clusterings in Hierarchical Tree Decompositions Using the Variation of Information	claim
11	150	How Many Bootstrap Replicates Are Necessary?	claim
12	144	Combinatorial Algorithms for Structural Variation Detection in High Throughput Sequenced Genomes	claim
13	143	Cross Species Expression Analysis of Innate Immune Response	claim
14	142	An Online Approach for Mining Collective Behaviors from Molecular Dynamics Simulations	claim
15	139	Searching Protein 3-D Structures in Linear Time	claim
16	136	Shared Peptides in Mass Spectrometry Based Protein Quantification	claim
17	136	Storage and Retrieval of Individual Genomes	claim
18	133	Inferring the Recent Duplication History of a Gene Cluster	claim
19	131	New Perspectives on Gene Family Evolution: Losses in Reconciliation and a Link with Supertrees	claim
20	129	Topology-Free Querying of Protein Interaction Networks	claim
21	126	Lifting Prediction to Alignment of RNA Pseudoknots	claim
22	122	A Probabilistic Graphical Model for Ab Initio Folding	claim
23	119	Evaluating Between-Pathway Models with Expression Data	claim
24	119	Protein Fragment Swapping: A Method for Asymmetric, Selective Site-Directed Recombination	claim
25	118	Finding Nested Common Intervals Efficiently	claim
26	109	Reconstructing Histories of Complex Gene Clusters on a Phylogeny	claim
27	106	Phylogenies without Branch Bounds: Contracting the Short, Pruning the Deep	claim
28	102	Yeast Ancestral Genome Reconstructions: The Possibilities of Computational Methods	claim
29	102	Rearrangement Models and Single-Cut Operations	claim
30	99	Pseudo Boolean Programming for Partially Ordered Genomes	claim
31	98	Sorting Signed Permutations by Inversions in O(nlogn) Time	claim

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