This paper presents a freely available evaluation tool for dependency parsing, MaltEval (http://w3.msi.vxu.se/users/jni/malteval). It is flexible and extensible, and provides functionality for both quantitative evaluation and visualization of dependency structure. The quantitative evaluation is compatible with other standard evaluation software for dependency structure which does not produce visualization of dependency structure, and can output more details as well as new types of evaluation metrics. In addition, MaltEval has generic support for confusion matrices. It can also produce statistical significance tests when more than one parsed file is specified. The visualization module also has the ability to highlight discrepancies between the gold-standard files and the parsed files, and it comes with an easy to use GUI functionality to search in the dependency structure of the input files.