State of the art: refinement of multiple sequence alignments

Correction to Chakrabarti S, Lanczycki CJ, Panchenko AR, Przytycka TM, Thiessen PA and Bryant SH: State of the art: refinement of multiple sequence alignments. BMC Bioinformatics 2006, 7:499. Correction After publication of [1] we have noticed an error in our manuscript. We have realized that there were some numbers incorrectly inserted within the Table 1 of the manuscript [1]. Corrected values are now provided In Table 1, for six of the numbers that were entered incorrectly: the SP scores for References 1, 4 and 5 under Muscle reference alignment (REFINER refinement alignment) and, SP scores for References 2, 3 and 5 under T-Coffee reference alignment (Default refinement Table 1 Impact on alignment quality following refinement. BAliBASE reference alignments ClustalW Dialign Mafft Default RASCAL RF REFINER Default RASCAL RF REFINER Default RASCAL RF REFINER Reference 1 0.65 0.63 0.66 0.66 0.62 0.65 0.67 0.62 0.70 0.69 0.69 0.71 Reference 2 0.78 0.80 0.80 0.80 0.78 0.80 0.79 0.79 0.83 ...

• Type: Journal
• Year: 2010
• Where: BMCBI
• Authors: Saikat Chakrabarti, Christopher J. Lanczycki, Anna R. Panchenko, Teresa M. Przytycka, Paul A. Thiessen, Stephen H. Bryant
• Keywords: BMCBI 2010, Default RASCAL RF, RASCAL RF REFINER, Reference Alignments