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ALGORITHMICA
1999
99views more  ALGORITHMICA 1999»
13 years 8 months ago
Evolutionary Trees and Ordinal Assertions
Sequence data for a group of species is often summarized by a distance matrix M where M[s, t] is the dissimilarity between the sequences of species s and t. An ordinal assertion is...
Paul E. Kearney, Ryan Hayward, Henk Meijer
ECML
2007
Springer
14 years 2 months ago
Learning Metrics Between Tree Structured Data: Application to Image Recognition
The problem of learning metrics between structured data (strings, trees or graphs) has been the subject of various recent papers. With regard to the specific case of trees, some a...
Laurent Boyer 0002, Amaury Habrard, Marc Sebban
RECOMB
1997
Springer
14 years 21 days ago
On the complexity and approximation of syntenic distance
The paper studies the computational complexity and approximation algorithms for a new evolutionary distance between multi-chromosomal genomes introduced recently by Ferretti, Nade...
Bhaskar DasGupta, Tao Jiang, Sampath Kannan, Ming ...
SODA
2003
ACM
142views Algorithms» more  SODA 2003»
13 years 10 months ago
The similarity metric
—A new class of distances appropriate for measuring similarity relations between sequences, say one type of similarity per distance, is studied. We propose a new “normalized in...
Ming Li, Xin Chen, Xin Li, Bin Ma, Paul M. B. Vit&...
BMCBI
2011
13 years 3 months ago
Taxon ordering in phylogenetic trees: a workbench test
Background: Phylogenetic trees are an important tool for representing evolutionary relationships among organisms. In a phylogram or chronogram, the ordering of taxa is not conside...
Francesco Cerutti, Luigi Bertolotti, Tony L. Goldb...