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BMCBI
2007
164views more  BMCBI 2007»
13 years 7 months ago
SEARCHPATTOOL: a new method for mining the most specific frequent patterns for binding sites with application to prokaryotic DNA
Background: Computational methods to predict transcription factor binding sites (TFBS) based on exhaustive algorithms are guaranteed to find the best patterns but are often limite...
Fathi Elloumi, Martha Nason
ICASSP
2011
IEEE
12 years 11 months ago
Labeling skin tissues in ultrasound images using a generalized Rayleigh mixture model
This paper addresses the problem of estimating the statistical distribution of multiple-tissue non-stationary ultrasound images of skin. The distribution of multiple-tissue images...
Marcelo Pereyra, Nicolas Dobigeon, Hadj Batatia, J...
BMCBI
2010
190views more  BMCBI 2010»
13 years 7 months ago
Sample size and statistical power considerations in high-dimensionality data settings: a comparative study of classification alg
Background: Data generated using `omics' technologies are characterized by high dimensionality, where the number of features measured per subject vastly exceeds the number of...
Yu Guo, Armin Graber, Robert N. McBurney, Raji Bal...
ICASSP
2011
IEEE
12 years 11 months ago
A Bernoulli-Gaussian model for gene factor analysis
This paper investigates a Bayesian model and a Markov chain Monte Carlo (MCMC) algorithm for gene factor analysis. Each sample in the dataset is decomposed as a linear combination...
Cecile Bazot, Nicolas Dobigeon, Jean-Yves Tournere...
BIOCOMP
2007
13 years 9 months ago
Biomarker Discovery Across Annotated and Unannotated Microarray Datasets Using Semi-Supervised Learning
The growing body of DNA microarray data has the potential to advance our understanding of the molecular basis of disease. However annotating microarray datasets with clinically us...
Cole Harris, Noushin Ghaffari