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BMCBI
2005
80views more  BMCBI 2005»
13 years 7 months ago
Gene finding in the chicken genome
Background: Despite the continuous production of genome sequence for a number of organisms, reliable, comprehensive, and cost effective gene prediction remains problematic. This i...
Eduardo Eyras, Alexandre Reymond, Robert Castelo, ...
AAAI
2006
13 years 8 months ago
Heuristic Search and Information Visualization Methods for School Redistricting
We describe an application of AI search and information visualization techniques to the problem of school redistricting, in which students are assigned to home schools within a co...
Marie desJardins, Blazej Bulka, Ryan Carr, Andrew ...
CVPR
2007
IEEE
14 years 1 months ago
Hierarchical Structuring of Data on Manifolds
Manifold learning methods are promising data analysis tools. However, if we locate a new test sample on the manifold, we have to find its embedding by making use of the learned e...
Jun Li, Pengwei Hao
BMCBI
2010
137views more  BMCBI 2010»
13 years 7 months ago
BS Seeker: precise mapping for bisulfite sequencing
Background: Bisulfite sequencing using next generation sequencers yields genome-wide measurements of DNA methylation at single nucleotide resolution. Traditional aligners are not ...
Pao-Yang Chen, Shawn Cokus, Matteo Pellegrini
BMCBI
2007
134views more  BMCBI 2007»
13 years 7 months ago
Benchmarking natural-language parsers for biological applications using dependency graphs
Background: Interest is growing in the application of syntactic parsers to natural language processing problems in biology, but assessing their performance is difficult because di...
Andrew B. Clegg, Adrian J. Shepherd