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» A Comparative Study of Three Program Exploration Tools
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ICFEM
2009
Springer
14 years 23 days ago
An Empirical Study of Structural Constraint Solving Techniques
Structural constraint solving allows finding object graphs that satisfy given constraints, thereby enabling software reliability tasks, such as systematic testing and error recove...
Junaid Haroon Siddiqui, Sarfraz Khurshid
RECONFIG
2009
IEEE
182views VLSI» more  RECONFIG 2009»
14 years 2 months ago
Scalability Studies of the BLASTn Scan and Ungapped Extension Functions
BLASTn is a ubiquitous tool used for large scale DNA analysis. Detailed profiling tests reveal that the most computationally intensive sections of the BLASTn algorithm are the sc...
Siddhartha Datta, Ron Sass
ISORC
2007
IEEE
14 years 2 months ago
QUICKER: A Model-Driven QoS Mapping Tool for QoS-Enabled Component Middleware
This paper provides three contributions to the study of quality of service (QoS) configuration in component-based DRE systems. First, we describe the challenges associated with m...
Amogh Kavimandan, Krishnakumar Balasubramanian, Ni...
BMCBI
2008
97views more  BMCBI 2008»
13 years 8 months ago
Comparison study on k-word statistical measures for protein: From sequence to 'sequence space'
Background: Many proposed statistical measures can efficiently compare protein sequence to further infer protein structure, function and evolutionary information. They share the s...
Qi Dai, Tian-Ming Wang
BMCBI
2006
136views more  BMCBI 2006»
13 years 8 months ago
Java GUI for InterProScan (JIPS): A tool to help process multiple InterProScans and perform ortholog analysis
Background: Recent, rapid growth in the quantity of available genomic data has generated many protein sequences that are not yet biochemically classified. Thus, the prediction of ...
Aijazuddin Syed, Chris Upton