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RECOMB
1997
Springer
13 years 12 months ago
A branch-and-cut algorithm for multiple sequence alignment
Multiple sequence alignment is an important problem in computational biology. We study the Maximum Trace formulation introduced by Kececioglu [?]. We first phrase the problem in ...
Knut Reinert, Hans-Peter Lenhof, Petra Mutzel, Kur...
VLDB
2004
ACM
161views Database» more  VLDB 2004»
14 years 8 months ago
Supporting top-k join queries in relational databases
Ranking queries produce results that are ordered on some computed score. Typically, these queries involve joins, where users are usually interested only in the top-k join results....
Ihab F. Ilyas, Walid G. Aref, Ahmed K. Elmagarmid
BMCBI
2005
152views more  BMCBI 2005»
13 years 7 months ago
Improved profile HMM performance by assessment of critical algorithmic features in SAM and HMMER
Background: Profile hidden Markov model (HMM) techniques are among the most powerful methods for protein homology detection. Yet, the critical features for successful modelling ar...
Markus Wistrand, Erik L. L. Sonnhammer
TASE
2008
IEEE
13 years 7 months ago
New Solution Approaches to the General Single- Machine Earliness-Tardiness Problem
This paper addresses the general single-machine earliness-tardiness problem with distinct release dates, due dates, and unit costs. The aim of this research is to obtain an exact n...
Hoksung Yau, Yunpeng Pan, Leyuan Shi
CVIU
2008
192views more  CVIU 2008»
13 years 7 months ago
Content based video matching using spatiotemporal volumes
This paper presents a novel framework for matching video sequences using the spatiotemporal segmentation of videos. Instead of using appearance features for region correspondence ...
Arslan Basharat, Yun Zhai, Mubarak Shah