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» A Data Transformation System for Biological Data Sources
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TIME
2005
IEEE
15 years 9 months ago
Analysis of Timed Processes with Data Using Algebraic Transformations
The language of timed µCRL is an extension of an ACP-style process algebra-based language µCRL with time-related features. In this paper we describe this language and its equati...
Michel A. Reniers, Yaroslav S. Usenko
ISCI
2008
102views more  ISCI 2008»
15 years 4 months ago
Random walk biclustering for microarray data
A biclustering algorithm, based on a greedy technique and enriched with a local search strategy to escape poor local minima, is proposed. The algorithm starts with an initial rand...
Fabrizio Angiulli, Eugenio Cesario, Clara Pizzuti
RECOMB
2003
Springer
16 years 4 months ago
Finding recurrent sources in sequences
Many genomic sequences and, more generally, (multivariate) time series display tremendous variability. However, often it is reasonable to assume that the sequence is actually gene...
Aristides Gionis, Heikki Mannila
BMCBI
2008
86views more  BMCBI 2008»
15 years 4 months ago
Is plant mitochondrial RNA editing a source of phylogenetic incongruence? An answer from in silico and in vivo data sets
Background: In plant mitochondria, the post-transcriptional RNA editing process converts C to U at a number of specific sites of the mRNA sequence and usually restores phylogeneti...
Ernesto Picardi, Carla Quagliariello
EEE
2004
IEEE
15 years 7 months ago
e-Transformation Technologies: Case Studies and the Road Ahead - A Value Chain Perspective
e-Transformation technologies, for the past few years, have been evolving towards the goal of information integration and system interoperability. While there is no doubt that int...
William Kwok-Wai Cheung