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SIGMOD
2004
ACM
121views Database» more  SIGMOD 2004»
14 years 9 months ago
An Optimal Algorithm for Querying Tree Structures and its Applications in Bioinformatics
Trees and graphs are widely used to model biological databases. Providing efficient algorithms to support tree-based or graph-based querying is therefore an important issue. In th...
Hsiao-Fei Liu, Ya-Hui Chang, Kun-Mao Chao
BMCBI
2008
138views more  BMCBI 2008»
13 years 9 months ago
SynechoNET: integrated protein-protein interaction database of a model cyanobacterium Synechocystis sp. PCC 6803
Background: Cyanobacteria are model organisms for studying photosynthesis, carbon and nitrogen assimilation, evolution of plant plastids, and adaptability to environmental stresse...
Woo-Yeon Kim, Sungsoo Kang, Byoung-Chul Kim, Jeehy...
PVLDB
2008
163views more  PVLDB 2008»
13 years 8 months ago
C-DEM: a multi-modal query system for Drosophila Embryo databases
The amount of biological data publicly available has experienced an exponential growth as the technology advances. Online databases are now playing an important role as informatio...
Fan Guo, Lei Li, Christos Faloutsos, Eric P. Xing
BMCBI
2007
113views more  BMCBI 2007»
13 years 9 months ago
CoryneRegNet 4.0 - A reference database for corynebacterial gene regulatory networks
Background: Detailed information on DNA-binding transcription factors (the key players in the regulation of gene expression) and on transcriptional regulatory interactions of micr...
Jan Baumbach
BMCBI
2008
133views more  BMCBI 2008»
13 years 9 months ago
SPIKE - a database, visualization and analysis tool of cellular signaling pathways
Background: Biological signaling pathways that govern cellular physiology form an intricate web of tightly regulated interlocking processes. Data on these regulatory networks are ...
Ran Elkon, Rita Vesterman, Nira Amit, Igor Ulitsky...