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ICCSA
2004
Springer
14 years 2 months ago
A Sequence-Focused Parallelisation of EMBOSS on a Cluster of Workstations
Abstract. A number of individual bioinformatics applications (particularly BLAST and other sequence searching methods) have recently been implemented over clusters of workstations ...
Karl Podesta, Martin Crane, Heather J. Ruskin
ICEIS
2003
IEEE
14 years 2 months ago
The Protein Structure Prediction Module of the Prot-Grid Information System
: In this work, we describe the protein secondary structure prediction module of a distributed bio-informatics system. Protein databases contain over a million of sequenced protein...
Dimitrios Vogiatzis, Dimitrios Frosyniotis, George...
CAISE
2003
Springer
14 years 2 months ago
Exp-DB: Fast Development of Information Systems for Experiment Tracking
Bioinformatics research groups require information systems keeping track of experiments and their results. However, current solutions are often ad-hoc, difficult to maintain, exten...
Nomair A. Naeem, Stéphane Raymond, Anne Pou...
BIOINFORMATICS
2011
13 years 22 days ago
When the Web meets the cell: using personalized PageRank for analyzing protein interaction networks
Motivation: Enormous, and constantly increasing quantity of biological information is represented in protein interaction network databases. Most of these data are freely accessibl...
Gábor Iván, Vince Grolmusz
BIODATAMINING
2008
117views more  BIODATAMINING 2008»
13 years 9 months ago
Search extension transforms Wiki into a relational system: A case for flavonoid metabolite database
Background: In computer science, database systems are based on the relational model founded by Edgar Codd in 1970. On the other hand, in the area of biology the word 'databas...
Masanori Arita, Kazuhiro Suwa