BIOINFORMATICS 2011

Teaser Browsing | Click Here

Title Browsing | Click Here

Wall of Fame | Most Viewed BIOINFORMATICS-2011 Paper

click to vote

BIOINFORMATICS
2011

390views Artificial Intelligence» more BIOINFORMATICS 2011»

Real-world comparison of CPU and GPU implementations of SNPrank: a network analysis tool for GWAS

13 years 6 months ago

Download insilico.utulsa.edu

Nicholas A. Davis, Ahwan Pandey, B. A. McKinney

claim paper

Read More »

Disclaimer and Copyright Notice

Sciweavers respects the rights of all copyright holders and in this regard, authors are only allowed to share a link to their preprint paper on their own website. Every contribution is associated with a desciptive image. It is the sole responsibility of the authors to ensure that their posted image is not copyright infringing. This service is compliant with IEEE copyright.

Id	Views	Title	Status

1	390	Real-world comparison of CPU and GPU implementations of SNPrank: a network analysis tool for GWAS	claim
2	355	ProDy: Protein Dynamics Inferred from Theory and Experiments	claim
3	229	Algorithms for sorting unsigned linear genomes by the DCJ operations	claim
4	228	Integrative network alignment reveals large regions of global network similarity in yeast and human	claim
5	222	A method for probing the mutational landscape of amyloid structure	claim
6	218	QuACN: an R package for analyzing complex biological networks quantitatively	claim
7	218	Modeling and comparing the organization of circular genomes	claim
8	218	RNA-RNA interaction prediction based on multiple sequence alignments	claim
9	215	von Bertalanffy 1.0: a COBRA toolbox extension to thermodynamically constrain metabolic models	claim
10	212	RINQ: Reference-based Indexing for Network Queries	claim
11	210	The Bayesian lasso for genome-wide association studies	claim
12	210	Construction of co-complex score matrix for protein complex prediction from AP-MS data	claim
13	209	The strength of chemical linkage as a criterion for pruning metabolic graphs	claim
14	207	TimeTree2: species divergence times on the iPhone	claim
15	202	Hidden conformations in protein structures	claim
16	201	WIST: toolkit for rapid, customized LIMS development	claim
17	201	STOCHSIMGPU: parallel stochastic simulation for the Systems Biology Toolbox 2 for MATLAB	claim
18	200	Optimized data fusion for K-means Laplacian clustering	claim
19	199	When the Web meets the cell: using personalized PageRank for analyzing protein interaction networks	claim
20	198	Automatic 3D neuron tracing using all-path pruning	claim
21	197	All-atom knowledge-based potential for RNA structure prediction and assessment	claim
22	197	BayesPeak - an R package for analysing ChIP-seq data	claim
23	194	Annotating genes and genomes with DNA sequences extracted from biomedical articles	claim
24	194	B2G-FAR, a species-centered GO annotation repository	claim
25	191	Automated analysis of information processing, kinetic independence and modular architecture in biochemical networks using MIDIA	claim
26	191	A pipeline for RNA-seq data processing and quality assessment	claim
27	190	A Ruby API to query the Ensembl database for genomic features	claim
28	188	Inverse perturbation for optimal intervention in gene regulatory networks	claim
29	187	Paintomics: a web based tool for the joint visualization of transcriptomics and metabolomics data	claim
30	185	Comparative visualization of genetic and physical maps with Strudel	claim
31	183	MTR: taxonomic annotation of short metagenomic reads using clustering at multiple taxonomic ranks	claim
32	181	Topology and prediction of RNA pseudoknots	claim
33	179	PhyloPro: a web-based tool for the generation and visualization of phylogenetic profiles across Eukarya	claim
34	178	Mapping ancestral genomes with massive gene loss: A matrix sandwich problem	claim
35	177	Cross-platform comparison of microarray data using order restricted inference	claim
36	165	Generalized random set framework for functional enrichment analysis using primary genomics datasets	claim
37	161	FISH Finder: a high-throughput tool for analyzing FISH images	claim
38	161	RuleBender: a visual interface for rule-based modeling	claim
39	157	libfbi: a C++ implementation for fast box intersection and application to sparse mass spectrometry data	claim
40	144	Rigid substructure search	claim
41	144	FIMO: scanning for occurrences of a given motif	claim

Sciweavers

Explore & Download

Productivity Tools

Document Tools

Image Tools

Sciweavers