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BMCBI
2008
86views more  BMCBI 2008»
13 years 8 months ago
Predicting protein linkages in bacteria: Which method is best depends on task
Background: Applications of computational methods for predicting protein functional linkages are increasing. In recent years, several bacteria-specific methods for predicting link...
Anis Karimpour-Fard, Sonia M. Leach, Ryan T. Gill,...
BMCBI
2006
128views more  BMCBI 2006»
13 years 8 months ago
Comparative assessment of performance and genome dependence among phylogenetic profiling methods
Background: The rapidly increasing speed with which genome sequence data can be generated will be accompanied by an exponential increase in the number of sequenced eukaryotes. Wit...
Evan S. Snitkin, Adam M. Gustafson, Joseph C. Mell...
BMCBI
2007
132views more  BMCBI 2007»
13 years 8 months ago
Dependence of paracentric inversion rate on tract length
Background: We develop a Bayesian method based on MCMC for estimating the relative rates of pericentric and paracentric inversions from marker data from two species. The method al...
Thomas L. York, Richard Durrett, Rasmus Nielsen
TASLP
2008
140views more  TASLP 2008»
13 years 8 months ago
Acoustic Chord Transcription and Key Extraction From Audio Using Key-Dependent HMMs Trained on Synthesized Audio
We describe an acoustic chord transcription system that uses symbolic data to train hidden Markov models and gives best-of-class frame-level recognition results. We avoid the extre...
Kyogu Lee, Malcolm Slaney
PAMI
2008
155views more  PAMI 2008»
13 years 7 months ago
Subclass Problem-Dependent Design for Error-Correcting Output Codes
A common way to model multiclass classification problems is by means of Error-Correcting Output Codes (ECOCs). Given a multiclass problem, the ECOC technique designs a code word fo...
Sergio Escalera, David M. J. Tax, Oriol Pujol, Pet...