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» A Discriminant Analysis for Undersampled Data
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BMCBI
2010
95views more  BMCBI 2010»
13 years 7 months ago
An effective approach for identification of in vivo protein-DNA binding sites from paired-end ChIP-Seq data
Background: ChIP-Seq, which combines chromatin immunoprecipitation (ChIP) with high-throughput massively parallel sequencing, is increasingly being used for identification of prot...
Congmao Wang, Jie Xu, Dasheng Zhang, Zoe A. Wilson...
BMCBI
2007
194views more  BMCBI 2007»
13 years 7 months ago
Kernel-imbedded Gaussian processes for disease classification using microarray gene expression data
Background: Designing appropriate machine learning methods for identifying genes that have a significant discriminating power for disease outcomes has become more and more importa...
Xin Zhao, Leo Wang-Kit Cheung
BMCBI
2007
179views more  BMCBI 2007»
13 years 7 months ago
Transcript-level annotation of Affymetrix probesets improves the interpretation of gene expression data
Background: The wide use of Affymetrix microarray in broadened fields of biological research has made the probeset annotation an important issue. Standard Affymetrix probeset anno...
Hui Yu, Feng Wang, Kang Tu, Lu Xie, Yuan-Yuan Li, ...
CVPR
2009
IEEE
15 years 2 months ago
Learning a Distance Metric from Multi-instance Multi-label Data
Multi-instance multi-label learning (MIML) refers to the learning problems where each example is represented by a bag/collection of instances and is labeled by multiple labels. ...
Rong Jin (Michigan State University), Shijun Wang...
BIOINFORMATICS
2010
108views more  BIOINFORMATICS 2010»
13 years 6 months ago
Mass spectrometry data processing using zero-crossing lines in multi-scale of Gaussian derivative wavelet
Motivation: Peaks are the key information in Mass Spectrometry (MS) which has been increasingly used to discover diseases related proteomic patterns. Peak detection is an essentia...
Nha Nguyen, Heng Huang, Soontorn Oraintara, An P. ...