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CLUSTER
2003
IEEE
14 years 20 days ago
Parallel Design Pattern for Computational Biology and Scientific Computing Applications
Dynamic programming is an important algorithm design technique in computational biology and scientific computing. Typical applications using this technique are very compute-intens...
Weiguo Liu, Bertil Schmidt
EGPGV
2004
Springer
143views Visualization» more  EGPGV 2004»
14 years 23 days ago
Massive Data Pre-Processing with a Cluster Based Approach
Data coming from complex simulation models reach easily dimensions much greater than available computational resources. Visualization of such data still represents the most intuit...
Rita Borgo, Valerio Pascucci, Roberto Scopigno
IPPS
2010
IEEE
13 years 5 months ago
Large-scale multi-dimensional document clustering on GPU clusters
Document clustering plays an important role in data mining systems. Recently, a flocking-based document clustering algorithm has been proposed to solve the problem through simulat...
Yongpeng Zhang, Frank Mueller, Xiaohui Cui, Thomas...
BMCBI
2011
13 years 2 months ago
DecGPU: distributed error correction on massively parallel graphics processing units using CUDA and MPI
Background: Next-generation sequencing technologies have led to the high-throughput production of sequence data (reads) at low cost. However, these reads are significantly shorter...
Yongchao Liu, Bertil Schmidt, Douglas L. Maskell
TPDS
1998
112views more  TPDS 1998»
13 years 7 months ago
Parallel Computation in Biological Sequence Analysis
—A massive volume of biological sequence data is available in over 36 different databases worldwide, including the sequence data generated by the Human Genome project. These data...
Tieng K. Yap, Ophir Frieder, Robert L. Martino