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IMSCCS
2006
IEEE
14 years 3 months ago
Combining Comparative Genomics with de novo Motif Discovery to Identify Human Transcription Factor DNA-Binding Motifs
Background: As more and more genomes are sequenced, comparative genomics approaches provide a methodology for identifying conserved regulatory elements that may be involved in gen...
Linyong Mao, W. Jim Zheng
ICASSP
2011
IEEE
13 years 1 months ago
Co-clustering as multilinear decomposition with sparse latent factors
The K-means clustering problem seeks to partition the columns of a data matrix in subsets, such that columns in the same subset are ‘close’ to each other. The co-clustering pr...
Evangelos E. Papalexakis, Nicholas D. Sidiropoulos
ICS
2005
Tsinghua U.
14 years 3 months ago
Parallel sparse LU factorization on second-class message passing platforms
Several message passing-based parallel solvers have been developed for general (non-symmetric) sparse LU factorization with partial pivoting. Due to the fine-grain synchronizatio...
Kai Shen
NAR
2011
157views Computer Vision» more  NAR 2011»
13 years 19 days ago
PlantTFDB 2.0: update and improvement of the comprehensive plant transcription factor database
We updated the plant transcription factor (TF) database to version 2.0 (PlantTFDB 2.0, http:// planttfdb.cbi.pku.edu.cn) which contains 53 319 putative TFs predicted from 49 speci...
He Zhang, Jinpu Jin, Liang Tang, Yi Zhao, Xiaochen...
PPAM
2007
Springer
14 years 3 months ago
The Relevance of New Data Structure Approaches for Dense Linear Algebra in the New Multi-Core / Many Core Environments
For about ten years now, Bo K˚agstr¨om’s Group in Umea, Sweden, Jerzy Wa´sniewski’s Team at Danish Technical University in Lyngby, Denmark, and I at IBM Research in Yorktown...
Fred G. Gustavson