Sciweavers

49 search results - page 7 / 10
» A Fast Algorithm for Approximate String Matching on Gene Seq...
Sort
View
CCECE
2006
IEEE
14 years 1 months ago
Survey of Biological High Performance Computing: Algorithms, Implementations and Outlook Research
During recent years there has been an explosive growth of biological data coming from genome projects, proteomics, protein structure determination, and the rapid expansion in digi...
Nasreddine Hireche, J. M. Pierre Langlois, Gabriel...
WABI
2009
Springer
132views Bioinformatics» more  WABI 2009»
14 years 2 months ago
mpscan: Fast Localisation of Multiple Reads in Genomes
Abstract. With Next Generation Sequencers, sequence based transcriptomic or epigenomic assays yield millions of short sequence reads that need to be mapped back on a reference geno...
Eric Rivals, Leena Salmela, Petteri Kiiskinen, Pet...
IJFCS
2006
87views more  IJFCS 2006»
13 years 7 months ago
Flexible Music Retrieval in Sublinear Time
Music sequences can be treated as texts in order to perform music retrieval tasks on them. However, the text search problems that result from this modeling are unique to music retr...
Kimmo Fredriksson, Veli Mäkinen, Gonzalo Nava...
WABI
2004
Springer
14 years 27 days ago
Finding Optimal Pairs of Patterns
We consider the problem of finding the optimal pair of string patterns for discriminating between two sets of strings, i.e. finding the pair of patterns that is best with respect...
Hideo Bannai, Heikki Hyyrö, Ayumi Shinohara, ...
CIKM
2009
Springer
14 years 2 months ago
Fast and effective histogram construction
Histogram construction or sequence segmentation is a basic task with applications in database systems, information retrieval, and knowledge management. Its aim is to approximate a...
Felix Halim, Panagiotis Karras, Roland H. C. Yap