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BMCBI
2007
217views more  BMCBI 2007»
13 years 8 months ago
On consensus biomarker selection
Background: Recent development of mass spectrometry technology enabled the analysis of complex peptide mixtures. A lot of effort is currently devoted to the identification of biom...
Janusz Dutkowski, Anna Gambin
BMCBI
2007
166views more  BMCBI 2007»
13 years 8 months ago
Optimization of filtering criterion for SEQUEST database searching to improve proteome coverage in shotgun proteomics
Background: In proteomic analysis, MS/MS spectra acquired by mass spectrometer are assigned to peptides by database searching algorithms such as SEQUEST. The assignations of pepti...
Xinning Jiang, Xiaogang Jiang, Guanghui Han, Mingl...
GECCO
2010
Springer
186views Optimization» more  GECCO 2010»
13 years 9 months ago
Genetic rule extraction optimizing brier score
Most highly accurate predictive modeling techniques produce opaque models. When comprehensible models are required, rule extraction is sometimes used to generate a transparent mod...
Ulf Johansson, Rikard König, Lars Niklasson
KDD
2002
ACM
170views Data Mining» more  KDD 2002»
14 years 8 months ago
Enhanced word clustering for hierarchical text classification
In this paper we propose a new information-theoretic divisive algorithm for word clustering applied to text classification. In previous work, such "distributional clustering&...
Inderjit S. Dhillon, Subramanyam Mallela, Rahul Ku...
CEC
2010
IEEE
13 years 9 months ago
Improving GP classification performance by injection of decision trees
This paper presents a novel hybrid method combining genetic programming and decision tree learning. The method starts by estimating a benchmark level of reasonable accuracy, based ...
Rikard König, Ulf Johansson, Tuve Löfstr...