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BMCBI
2011
13 years 2 months ago
ASPDock: protein-protein docking algorithm using atomic solvation parameters model
Background: Atomic Solvation Parameters (ASP) model has been proven to be a very successful method of calculating the binding free energy of protein complexes. This suggests that ...
Lin Li, Dachuan Guo, Yangyu Huang, Shiyong Liu, Yi...
PPOPP
2006
ACM
14 years 1 months ago
Optimizing irregular shared-memory applications for distributed-memory systems
In prior work, we have proposed techniques to extend the ease of shared-memory parallel programming to distributed-memory platforms by automatic translation of OpenMP programs to ...
Ayon Basumallik, Rudolf Eigenmann
ICS
2001
Tsinghua U.
13 years 11 months ago
Integrating superscalar processor components to implement register caching
A large logical register file is important to allow effective compiler transformations or to provide a windowed space of registers to allow fast function calls. Unfortunately, a l...
Matt Postiff, David Greene, Steven E. Raasch, Trev...
DILS
2009
Springer
13 years 11 months ago
A Visual Interface for on-the-fly Biological Database Integration and Workflow Design Using VizBuilder
Abstract. Data integration plays a major role in modern Life Sciences research primarily because required resources are geographically distributed across continents and experts dep...
Shahriyar Hossain, Hasan M. Jamil
CASES
2006
ACM
14 years 1 months ago
Automated compile-time and run-time techniques to increase usable memory in MMU-less embedded systems
Random access memory (RAM) is tightly-constrained in many embedded systems. This is especially true for the least expensive, lowest-power embedded systems, such as sensor network ...
Lan S. Bai, Lei Yang, Robert P. Dick