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» A Framework for Modelling and Simulating Networks of Cells
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FPGA
2004
ACM
174views FPGA» more  FPGA 2004»
14 years 1 months ago
A compiled accelerator for biological cell signaling simulations
The simulation of large systems of biochemical reactions is a key part of research into molecular signaling and information processing in biological cells. However, it can be impr...
John F. Keane, Christopher Bradley, Carl Ebeling
GLOBECOM
2007
IEEE
14 years 2 months ago
Spatial Outage Probability for Cellular Networks
— In this paper, we propose a new framework for the study of cellular networks called the fluid model and we derive from this model analytical formulas for interference, outage ...
Jean Marc Kelif, Marceau Coupechoux, Philippe Godl...
ICONIP
2004
13 years 9 months ago
Modeling Gene Regulatory Network in Fission Yeast Cell Cycle Using Hybrid Petri Nets
The complexity of gene regulatory network models stems from the fact that the models should be able to represent continuous, discrete as well as stochastic aspects of gene regulati...
Ranjith Vasireddy, Somenath Biswas
BMCBI
2007
103views more  BMCBI 2007»
13 years 7 months ago
Dynamic simulation of regulatory networks using SQUAD
Background: The ambition of most molecular biologists is the understanding of the intricate network of molecular interactions that control biological systems. As scientists uncove...
Alessandro Di Cara, Abhishek Garg, Giovanni De Mic...
CIBB
2009
13 years 8 months ago
On the Use of Temporal Formal Logic to Model Gene Regulatory Networks
Modelling activities in molecular biology face the difficulty of prediction to link molecular knowledge with cell phenotypes. Even when the interaction graph between molecules is k...
Gilles Bernot, Jean-Paul Comet