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» A Generalization of Automatic Sequences
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JCDL
2004
ACM
103views Education» more  JCDL 2004»
14 years 2 months ago
Integration of biomedical text and sequence OAI repositories
Archived biomedical literature and sequence data are growing rapidly. The Open Archives Initiative's Protocol for Metadata Harvesting (OAI-PMH) [1] provides a convenient way ...
Yueyu Fu, Javed Mostafa
GECCO
2008
Springer
165views Optimization» more  GECCO 2008»
13 years 10 months ago
Multiple sequence alignment using a GLOCSA guided genetic algorithm
This paper introduces GLOCSA as a new scoring function to rate multiple sequence alignments. It is intended to be simple, considering the whole alignment at once and reflecting t...
Edgar David Arenas-Díaz, Helga Ochoterena-B...
AAECC
2006
Springer
120views Algorithms» more  AAECC 2006»
13 years 9 months ago
Continued fraction for formal laurent series and the lattice structure of sequences
Abstract Besides equidistribution properties and statistical independence the lattice profile, a generalized version of Marsaglia's lattice test, provides another quality meas...
Wilfried Meidl
IPL
2006
67views more  IPL 2006»
13 years 9 months ago
A remark on the subsequence problem for arc-annotated sequences with pairwise nested arcs
The Arc-Preserving Subsequence (APS) problem appears in the comparison of RNA structures in computational biology. Given two arcannotated sequences of length n and m < n, APS a...
Peter Damaschke
TIT
2002
57views more  TIT 2002»
13 years 8 months ago
Writing sequences on the plane
The problem of arranging two-dimensional arrays of data into one-dimensional sequences comes up in image processing, color quantization, and optical and magnetic data recording. A ...
Emina Soljanin