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» A Generalization of Automatic Sequences
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BMCBI
2006
144views more  BMCBI 2006»
15 years 4 months ago
methBLAST and methPrimerDB: web-tools for PCR based methylation analysis
Background: DNA methylation plays an important role in development and tumorigenesis by epigenetic modification and silencing of critical genes. The development of PCR-based methy...
Filip Pattyn, Jasmien Hoebeeck, Piet Robbrecht, Ev...
BMCBI
2007
100views more  BMCBI 2007»
15 years 4 months ago
Discovering structural motifs using a structural alphabet: Application to magnesium-binding sites
Background: For many metalloproteins, sequence motifs characteristic of metal-binding sites have not been found or are so short that they would not be expected to be metal-specifi...
Minko Dudev, Carmay Lim
BMCBI
2007
114views more  BMCBI 2007»
15 years 4 months ago
Gene models from ESTs (GeneModelEST): an application on the Solanum lycopersicum genome
Background: The structure annotation of a genome is based either on ab initio methodologies or on similaritiy searches versus molecules that have been already annotated. Ab initio...
Nunzio D'Agostino, Alessandra Traini, Luigi Frusci...
BMCBI
2005
82views more  BMCBI 2005»
15 years 4 months ago
A novel method for prokaryotic promoter prediction based on DNA stability
Background: In the post-genomic era, correct gene prediction has become one of the biggest challenges in genome annotation. Improved promoter prediction methods can be one step to...
Aditi Kanhere, Manju Bansal
RV
2010
Springer
127views Hardware» more  RV 2010»
15 years 2 months ago
You Should Better Enforce Than Verify
This tutorial deals with runtime enforcement which is an extension of runtime verification aiming to circumvent misbehaviors of systems. After an historical overview of previous a...
Yliès Falcone