Background: Knowledge-based potentials have been widely used in the last 20 years for fold recognition, protein structure prediction from amino acid sequence, ligand binding, prot...
Yaping Feng, Andrzej Kloczkowski, Robert L. Jernig...
Abstract. In this paper, we propose more flexible applicability conditions for the folding rule that increase the power of existing unfold/fold systems for normal logic programs. O...
Background: Clustered Regularly Interspaced Palindromic Repeats (CRISPRs) are a novel type of direct repeat found in a wide range of bacteria and archaea. CRISPRs are beginning to...
Charles Bland, Teresa L. Ramsey, Fareedah Sabree, ...
: In this paper, we introduce ordered clauses as defined a sequence of literals, and investigate the properties of generalizations for ordered clauses. Furthermore, we show that t...
Over the last two decades a large number of algorithms has been developed for regulatory motif finding. Here we show how many of these algorithms, especially those that model bind...