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ISMB
2007
14 years 16 days ago
A Chado case study: an ontology-based modular schema for representing genome-associated biological information
Motivation: A few years ago, FlyBase undertook to design a new database schema to store Drosophila data. It would fully integrate genomic sequence and annotation data with bibliog...
Chris Mungall, David B. Emmert
TREC
2003
13 years 11 months ago
Searching for geneRIFs: Concept-Based Query Expansion and Bayes Classification
k gene annotations. Our indexing machinery produces per indexed MEDLINE abstract a list of concepts with an accompanying weight, termed a fingerprint. Searching is done by matching...
Rob Jelier, Martijn J. Schuemie, C. Christiaan van...
CORR
2010
Springer
119views Education» more  CORR 2010»
13 years 10 months ago
Report on the XBase Project
This project addressed the conceptual fundamentals of data storage, investigating techniques for provision of highly generic storage facilities that can be tailored to produce var...
Evangelos Zirintsis, Graham N. C. Kirby, Alan Dear...
BMCBI
2006
122views more  BMCBI 2006»
13 years 10 months ago
A domain-oriented approach to the reduction of combinatorial complexity in signal transduction networks
Background:Receptors and scaffold proteins possess a number of distinct domains and bind multiple partners. A common problem in modeling signaling systems arises from a combinator...
Holger Conzelmann, Julio Saez-Rodriguez, Thomas Sa...
BMCBI
2007
98views more  BMCBI 2007»
13 years 10 months ago
Evaluation of 3D-Jury on CASP7 models
Background: 3D-Jury, the structure prediction consensus method publicly available in the Meta Server http://meta.bioinfo.pl/, was evaluated using models gathered in the 7th round ...
László Kaján, Leszek Rychlews...