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» A Genetic Classifier Tool
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130
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BMCBI
2010
153views more  BMCBI 2010»
15 years 3 months ago
PPLook: an automated data mining tool for protein-protein interaction
Background: Extracting and visualizing of protein-protein interaction (PPI) from text literatures are a meaningful topic in protein science. It assists the identification of inter...
Shao-Wu Zhang, Yao-Jun Li, Li Xia, Quan Pan
BMCBI
2007
93views more  BMCBI 2007»
15 years 3 months ago
SVM-Fold: a tool for discriminative multi-class protein fold and superfamily recognition
Background: Predicting a protein’s structural class from its amino acid sequence is a fundamental problem in computational biology. Much recent work has focused on developing ne...
Iain Melvin, Eugene Ie, Rui Kuang, Jason Weston, W...
136
Voted
BMCBI
2005
131views more  BMCBI 2005»
15 years 3 months ago
Functional annotation by identification of local surface similarities: a novel tool for structural genomics
Background: Protein function is often dependent on subsets of solvent-exposed residues that may exist in a similar three-dimensional configuration in non homologous proteins thus ...
Fabrizio Ferrè, Gabriele Ausiello, Andreas ...
ISCAS
2005
IEEE
142views Hardware» more  ISCAS 2005»
15 years 9 months ago
Hardware-based support vector machine classification in logarithmic number systems
—Support Vector Machines are emerging as a powerful machine-learning tool. Logarithmic Number Systems (LNS) utilize the property of logarithmic compression for numerical operatio...
Faisal M. Khan, Mark G. Arnold, William M. Potteng...
97
Voted
SAC
2009
ACM
15 years 10 months ago
HIVSetSubtype: software for subtype classification of HIV-1 sequences
An automated web based tool for assigning HIV-1 pure and recombinant subtypes within unaligned sequences is presented. The system combines the BLAST search algorithm and the recom...
Luciano Vieira de Araújo, Sabri S. Sanabani...