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» A Graph Theoretic Approach to Protein Structure Selection
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BMCBI
2007
99views more  BMCBI 2007»
13 years 8 months ago
Identifying allosteric fluctuation transitions between different protein conformational states as applied to Cyclin Dependent Ki
Background: The mechanisms underlying protein function and associated conformational change are dominated by a series of local entropy fluctuations affecting the global structure ...
Jenny Gu, Philip E. Bourne
SDM
2009
SIAM
149views Data Mining» more  SDM 2009»
14 years 5 months ago
Near-optimal Supervised Feature Selection among Frequent Subgraphs.
Graph classification is an increasingly important step in numerous application domains, such as function prediction of molecules and proteins, computerised scene analysis, and an...
Alexander J. Smola, Arthur Gretton, Hans-Peter Kri...
GG
2004
Springer
14 years 2 months ago
Constraints and Application Conditions: From Graphs to High-Level Structures
Abstract. Graph constraints and application conditions are most important for graph grammars and transformation systems in a large variety of application areas. Although different...
Hartmut Ehrig, Karsten Ehrig, Annegret Habel, Karl...
BMCBI
2005
77views more  BMCBI 2005»
13 years 8 months ago
Structural comparison of metabolic networks in selected single cell organisms
Background: There has been tremendous interest in the study of biological network structure. An array of measurements has been conceived to assess the topological properties of th...
Dongxiao Zhu, Zhaohui S. Qin
GFKL
2005
Springer
95views Data Mining» more  GFKL 2005»
14 years 2 months ago
An Indicator for the Number of Clusters: Using a Linear Map to Simplex Structure
Abstract. The problem of clustering data can be formulated as a graph partitioning problem. In this setting, spectral methods for obtaining optimal solutions have received a lot of...
Marcus Weber, Wasinee Rungsarityotin, Alexander Sc...