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» A Graph Theoretic Approach to Protein Structure Selection
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TIT
2010
103views Education» more  TIT 2010»
13 years 3 months ago
Analysis of absorbing sets and fully absorbing sets of array-based LDPC codes
The class of low-density parity-check (LDPC) codes is attractive, since such codes can be decoded using practical message-passing algorithms, and their performance is known to app...
Lara Dolecek, Zhengya Zhang, Venkat Anantharam, Ma...
BMCBI
2008
135views more  BMCBI 2008»
13 years 8 months ago
Fregene: Simulation of realistic sequence-level data in populations and ascertained samples
Background: FREGENE simulates sequence-level data over large genomic regions in large populations. Because, unlike coalescent simulators, it works forwards through time, it allows...
Marc Chadeau-Hyam, Clive J. Hoggart, Paul F. O'Rei...
ACTA
2006
104views more  ACTA 2006»
13 years 8 months ago
Safe projections of binary data sets
Abstract Selectivity estimation of a boolean query based on frequent itemsets can be solved by describing the problem by a linear program. However, the number of variables in the e...
Nikolaj Tatti
ICCAD
2008
IEEE
140views Hardware» more  ICCAD 2008»
14 years 5 months ago
Algorithms for simultaneous consideration of multiple physical synthesis transforms for timing closure
We propose a post-placement physical synthesis algorithm that can apply multiple circuit synthesis and placement transforms on a placed circuit to improve the critical path delay ...
Huan Ren, Shantanu Dutt
BMCBI
2008
133views more  BMCBI 2008»
13 years 8 months ago
MS-DOCK: Accurate multiple conformation generator and rigid docking protocol for multi-step virtual ligand screening
Background: The number of protein targets with a known or predicted tri-dimensional structure and of drug-like chemical compounds is growing rapidly and so is the need for new the...
Nicolas Sauton, David Lagorce, Bruno O. Villoutrei...