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» A Heuristic Approach to Scoring Gene Clustering Algorithms
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SDM
2007
SIAM
74views Data Mining» more  SDM 2007»
13 years 8 months ago
HACS: Heuristic Algorithm for Clustering Subsets
The term consideration set is used in marketing to refer to the set of items a customer thought about purchasing before making a choice. While consideration sets are not directly ...
Ding Yuan, W. Nick Street
BMCBI
2007
125views more  BMCBI 2007»
13 years 7 months ago
Identification of discriminative characteristics for clusters from biologic data with InforBIO software
Background: There are a number of different methods for generation of trees and algorithms for phylogenetic analysis in the study of bacterial taxonomy. Genotypic information, suc...
Naoto Tanaka, Masataka Uchino, Satoru Miyazaki, Hi...
BMCBI
2005
113views more  BMCBI 2005»
13 years 7 months ago
Systematic survey reveals general applicability of "guilt-by-association" within gene coexpression networks
Background: Biological processes are carried out by coordinated modules of interacting molecules. As clustering methods demonstrate that genes with similar expression display incr...
Cecily J. Wolfe, Isaac S. Kohane, Atul J. Butte
WABI
2001
Springer
138views Bioinformatics» more  WABI 2001»
13 years 12 months ago
Algorithms for Finding Gene Clusters
Abstract. Comparing gene orders in completely sequenced genomes is a standard approach to locate clusters of functionally associated genes. Often, gene orders are modeled as permut...
Steffen Heber, Jens Stoye
BMCBI
2008
166views more  BMCBI 2008»
13 years 7 months ago
Biclustering via optimal re-ordering of data matrices in systems biology: rigorous methods and comparative studies
Background: The analysis of large-scale data sets via clustering techniques is utilized in a number of applications. Biclustering in particular has emerged as an important problem...
Peter A. DiMaggio Jr., Scott R. McAllister, Christ...