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» A Heuristic Approach to Scoring Gene Clustering Algorithms
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RECOMB
2006
Springer
14 years 8 months ago
Identification and Evaluation of Functional Modules in Gene Co-expression Networks
Abstract. Identifying gene functional modules is an important step towards elucidating gene functions at a global scale. In this paper, we introduce a simple method to construct ge...
Jianhua Ruan, Weixiong Zhang
BIOSYSTEMS
2007
111views more  BIOSYSTEMS 2007»
13 years 8 months ago
A Markovian approach to the control of genetic regulatory networks
This paper presents an approach for controlling gene networks based on a Markov chain model, where the state of a gene network is represented as a probability distribution, while ...
Peter C. Y. Chen, Jeremy W. Chen
AI
2006
Springer
14 years 8 days ago
A New Profile Alignment Method for Clustering Gene Expression Data
We focus on clustering gene expression temporal profiles, and propose a novel, simple algorithm that is powerful enough to find an efficient distribution of genes over clusters. We...
Ataul Bari, Luis Rueda
ICDM
2009
IEEE
117views Data Mining» more  ICDM 2009»
14 years 3 months ago
Redistricting Using Heuristic-Based Polygonal Clustering
— Redistricting is the process of dividing a geographic area into districts or zones. This process has been considered in the past as a problem that is computationally too comple...
Deepti Joshi, Leen-Kiat Soh, Ashok Samal
TCSB
2008
13 years 8 months ago
Clustering Time-Series Gene Expression Data with Unequal Time Intervals
Clustering gene expression data given in terms of time-series is a challenging problem that imposes its own particular constraints, namely exchanging two or more time points is not...
Luis Rueda, Ataul Bari, Alioune Ngom