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BMCBI
2007
83views more  BMCBI 2007»
13 years 7 months ago
Identification of sequence motifs significantly associated with antisense activity
Background: Predicting the suppression activity of antisense oligonucleotide sequences is the main goal of the rational design of nucleic acids. To create an effective predictive ...
Kyle A. McQuisten, Andrew S. Peek
ICALP
2003
Springer
14 years 22 days ago
Similarity Matrices for Pairs of Graphs
Abstract. We introduce a concept of similarity between vertices of directed graphs. Let GA and GB be two directed graphs with respectively nA and nB vertices. We define a nA × nB...
Vincent D. Blondel, Paul Van Dooren
BMCBI
2008
126views more  BMCBI 2008»
13 years 7 months ago
Relating gene expression data on two-component systems to functional annotations in Escherichia coli
Background: Obtaining physiological insights from microarray experiments requires computational techniques that relate gene expression data to functional information. Traditionall...
Anne M. Denton, Jianfei Wu, Megan K. Townsend, Pre...
SSD
2007
Springer
243views Database» more  SSD 2007»
14 years 1 months ago
Continuous Medoid Queries over Moving Objects
In the k-medoid problem, given a dataset P, we are asked to choose k points in P as the medoids. The optimal medoid set minimizes the average Euclidean distance between the points ...
Stavros Papadopoulos, Dimitris Sacharidis, Kyriako...
BMCBI
2006
164views more  BMCBI 2006»
13 years 7 months ago
Evaluation of clustering algorithms for gene expression data
Background: Cluster analysis is an integral part of high dimensional data analysis. In the context of large scale gene expression data, a filtered set of genes are grouped togethe...
Susmita Datta, Somnath Datta