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COMPLIFE
2005
Springer
14 years 1 months ago
Protein Annotation by Secondary Structure Based Alignments (PASSTA)
Abstract. Most software tools in homology recognition on proteins answer only a few specific questions, often leaving not much room for the interpretation of the results. We devel...
Constantin Bannert, Jens Stoye
ICDE
2003
IEEE
209views Database» more  ICDE 2003»
14 years 9 months ago
An Evaluation of Regular Path Expressions with Qualifiers against XML Streams
This paper presents SPEX, a streamed and progressive evaluation of regular path expressions with XPath-like qualifiers against XML streams. SPEX proceeds as follows. An expression...
Dan Olteanu, François Bry, Tobias Kiesling
BMCBI
2004
177views more  BMCBI 2004»
13 years 7 months ago
Gapped alignment of protein sequence motifs through Monte Carlo optimization of a hidden Markov model
Background: Certain protein families are highly conserved across distantly related organisms and belong to large and functionally diverse superfamilies. The patterns of conservati...
Andrew F. Neuwald, Jun S. Liu
ICVS
2009
Springer
14 years 2 months ago
White-Box Evaluation of Computer Vision Algorithms through Explicit Decision-Making
Traditionally computer vision and pattern recognition algorithms are evaluated by measuring differences between final interpretations and ground truth. These black-box evaluations ...
Richard Zanibbi, Dorothea Blostein, James R. Cordy
WOSP
2004
ACM
14 years 28 days ago
Collecting whole-system reference traces of multiprogrammed and multithreaded workloads
The simulated evaluation of memory management policies relies on reference traces—logs of memory operations performed by running processes. No existing approach to reference tra...
Scott F. Kaplan