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» A Language for Biochemical Systems
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KES
2007
Springer
14 years 2 months ago
A Hybrid Symbolic-Statistical Approach to Modeling Metabolic Networks
Biological systems consist of many components and interactions between them. In Systems Biology the principal problem is modeling complex biological systems and reconstructing inte...
Marenglen Biba, Stefano Ferilli, Nicola Di Mauro, ...
ICCMS
2009
118views more  ICCMS 2009»
13 years 6 months ago
Optimized Parallel Implementation of Gillespie's First Reaction Method on Graphics Processing Units
The simulation of chemical reacting systems is one of the most challenging topics in Systems Biology, due to their complexity and inherent randomness. The Gillespie's Stochas...
Cristian Dittamo, Davide Cangelosi
CRYPTO
2012
Springer
327views Cryptology» more  CRYPTO 2012»
11 years 11 months ago
Functional Encryption for Regular Languages
We provide a functional encryption system that supports functionality for regular languages. In our system a secret key is associated with a Deterministic Finite Automata (DFA) M....
Brent Waters
ENTCS
2010
103views more  ENTCS 2010»
13 years 6 months ago
A Model and Analysis of the AKAP Scaffold
We study the biochemical processes involved in scaffold-mediated crosstalk between the cAMP and the Raf-1/MEK/ERK pathways. We model the system by a continuous time Markov chain w...
Oana Andrei, Muffy Calder
GECCO
2004
Springer
150views Optimization» more  GECCO 2004»
14 years 2 months ago
Systems Biology Modeling in Human Genetics Using Petri Nets and Grammatical Evolution
Understanding the hierarchical relationships among biochemical, metabolic, and physiological systems in the mapping between genotype and phenotype is expected to improve the diagno...
Jason H. Moore, Lance W. Hahn