Sciweavers

11561 search results - page 9 / 2313
» A Language for Biochemical Systems
Sort
View
ICTAI
2003
IEEE
14 years 1 months ago
Extracting Biochemical Interactions from MEDLINE Using a Link Grammar Parser
Many natural language processing approaches at various complexity levels have been reported for extracting biochemical interactions from MEDLINE. While some algorithms using simpl...
Jing Ding, Daniel Berleant, Jun Xu, Andy W. Fulmer
BIB
2008
93views more  BIB 2008»
13 years 8 months ago
A structured approach for the engineering of biochemical network models, illustrated for signalling pathways
Quantitative models of biochemical networks (signal transduction cascades, metabolic pathways, gene regulatory circuits) are a central component of modern systems biology. Buildin...
Rainer Breitling, David Gilbert, Monika Heiner, Ri...
HYBRID
2007
Springer
14 years 14 days ago
Qualitative Analysis of Nonlinear Biochemical Networks with Piecewise-Affine Functions
Abstract. Nonlinearities and the lack of accurate quantitative information considerably hamper modeling and system analysis of biochemical networks. Here we propose a procedure for...
M. W. J. M. Musters, Hidde de Jong, P. P. J. van d...
BMCBI
2008
121views more  BMCBI 2008»
13 years 8 months ago
Modularization of biochemical networks based on classification of Petri net t-invariants
Background: Structural analysis of biochemical networks is a growing field in bioinformatics and systems biology. The availability of an increasing amount of biological data from ...
Eva Grafahrend-Belau, Falk Schreiber, Monika Heine...
APN
2006
Springer
13 years 10 months ago
From Petri Nets to Differential Equations - An Integrative Approach for Biochemical Network Analysis
Abstract. We report on the results of an investigation into the integration of Petri nets and ordinary differential equations (ODEs) for the modelling and analysis of biochemical n...
David Gilbert, Monika Heiner