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» A Linear Search Strategy using Bounds
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FOGA
2011
13 years 2 days ago
Approximating the distribution of fitness over hamming regions
The distribution of fitness values across a set of states sharply influences the dynamics of evolutionary processes and heuristic search in combinatorial optimization. In this p...
Andrew M. Sutton, Darrell Whitley, Adele E. Howe
BMCBI
2008
123views more  BMCBI 2008»
13 years 8 months ago
A tree-based conservation scoring method for short linear motifs in multiple alignments of protein sequences
Background: The structure of many eukaryotic cell regulatory proteins is highly modular. They are assembled from globular domains, segments of natively disordered polypeptides and...
Claudia Chica, Alberto Labarga, Cathryn M. Gould, ...
BMCBI
2007
143views more  BMCBI 2007»
13 years 8 months ago
An adaptive bin framework search method for a beta-sheet protein homopolymer model
Background: The problem of protein structure prediction consists of predicting the functional or native structure of a protein given its linear sequence of amino acids. This probl...
Alena Shmygelska, Holger H. Hoos
MIA
2010
170views more  MIA 2010»
13 years 3 months ago
Linear intensity-based image registration by Markov random fields and discrete optimization
We propose a framework for intensity-based registration of images by linear transformations, based on a discrete Markov Random Field (MRF) formulation. Here, the challenge arises ...
Darko Zikic, Ben Glocker, Oliver Kutter, Martin Gr...
INFOCOM
2009
IEEE
14 years 3 months ago
Searching for Stability in Interdomain Routing
—The Border Gateway Protocol (BGP) handles the task of establishing routes between the Autonomous Systems (ASes) that make up the Internet. It is known that it is possible for a ...
Rahul Sami, Michael Schapira, Aviv Zohar