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» A Massively Parallel Architecture for Bioinformatics
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IPPS
2002
IEEE
14 years 1 months ago
Portals 3.0: Protocol Building Blocks for Low Overhead Communication
This paper describes the evolution of the Portals message passing architecture and programming interface from its initial development on tightly-coupled massively parallel platfor...
Ron Brightwell, William Lawry, Arthur B. Maccabe, ...
ASAP
2006
IEEE
169views Hardware» more  ASAP 2006»
14 years 2 months ago
A Design Methodology for Hardware Acceleration of Adaptive Filter Algorithms in Image Processing
Massively parallel processor array architectures can be used as hardware accelerators for a plenty of dataflow dominant applications. Bilateral filtering is an example of a stat...
Hritam Dutta, Frank Hannig, Jürgen Teich, Ben...
PCI
2005
Springer
14 years 1 months ago
Initial Experiences Porting a Bioinformatics Application to a Graphics Processor
Bioinformatics applications are one of the most relevant and compute-demanding applications today. While normally these applications are executed on clusters or dedicated parallel ...
Maria Charalambous, Pedro Trancoso, Alexandros Sta...
SIGARCH
2008
144views more  SIGARCH 2008»
13 years 8 months ago
A stream chip-multiprocessor for bioinformatics
- Bioinformatics applications such as gene and protein sequence matching algorithms are characterized by the need to process large amounts of data. While uni-processor performance ...
Ravi Kiran Karanam, Arun Ravindran, Arindam Mukher...
ICGA
1993
75views Optimization» more  ICGA 1993»
13 years 9 months ago
Structure and Performance of Fine-Grain Parallelism in Genetic Search
Within the parallel genetic algorithm framework, there currently exists a growing dichotomy between coarse-pain and fine-grain parallel architectures. This paper attempts to chara...
Shumeet Baluja