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BMCBI
2010
117views more  BMCBI 2010»
13 years 7 months ago
New decoding algorithms for Hidden Markov Models using distance measures on labellings
Background: Existing hidden Markov model decoding algorithms do not focus on approximately identifying the sequence feature boundaries. Results: We give a set of algorithms to com...
Daniel G. Brown 0001, Jakub Truszkowski
ALT
2004
Springer
14 years 4 months ago
Hidden Markov Modelling Techniques for Haplotype Analysis
Abstract. A hidden Markov model is introduced for descriptive modelling the mosaic–like structures of haplotypes, due to iterated recombinations within a population. Methods usin...
Mikko Koivisto, Teemu Kivioja, Heikki Mannila, Pas...
MICAI
2007
Springer
14 years 1 months ago
An EM Algorithm to Learn Sequences in the Wavelet Domain
The wavelet transform has been used for feature extraction in many applications of pattern recognition. However, in general the learning algorithms are not designed taking into acc...
Diego H. Milone, Leandro E. Di Persia
ICIP
2006
IEEE
14 years 9 months ago
Detecting Occlusion for Hidden Markov Modeled Shapes
In this paper, we present a novel occlusion detection scheme for hidden Markov modeled shapes. First, hidden Markov model (HMM) is built using multiple examples of the shape. A re...
Ninad Thakoor, Sungyong Jung, Jean Gao
BMCBI
2007
94views more  BMCBI 2007»
13 years 7 months ago
A Hidden Markov Model to estimate population mixture and allelic copy-numbers in cancers using Affymetrix SNP arrays
Background: Affymetrix SNP arrays can interrogate thousands of SNPs at the same time. This allows us to look at the genomic content of cancer cells and to investigate the underlyi...
Philippe Lamy, Claus L. Andersen, Lars Dyrskjot, N...