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    BMCBI
    2007
    115views more  BMCBI 2007»
    Recognizing protein-protein interfaces with empirical potentials and reduced amino acid alphabets
    13 years 9 months ago
    Recognizing protein-protein interfaces with empirical potentials and reduced amino acid alphabets
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    Background: In structural genomics, an important goal is the detection and classification of protein–protein interactions, given the structures of the interacting partners. We h...
    Guillaume Launay, Raul Mendez, Shoshana J. Wodak, ...
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    BMCBI
    2007
    169views more  BMCBI 2007»
    The CRISPRdb database and tools to display CRISPRs and to generate dictionaries of spacers and repeats
    13 years 9 months ago
    The CRISPRdb database and tools to display CRISPRs and to generate dictionaries of spacers and repeats
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    Background: In Archeae and Bacteria, the repeated elements called CRISPRs for "clustered regularly interspaced short palindromic repeats" are believed to participate in ...
    Ibtissem Grissa, Gilles Vergnaud, Christine Pource...
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    BMCBI
    2007
    165views more  BMCBI 2007»
    Automatic reconstruction of a bacterial regulatory network using Natural Language Processing
    13 years 9 months ago
    Automatic reconstruction of a bacterial regulatory network using Natural Language Processing
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    Background: Manual curation of biological databases, an expensive and labor-intensive process, is essential for high quality integrated data. In this paper we report the implement...
    Carlos Rodríguez Penagos, Heladia Salgado, ...
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    BMCBI
    2007
    153views more  BMCBI 2007»
    Analysis of nanopore detector measurements using Machine-Learning methods, with application to single-molecule kinetic analysis
    13 years 9 months ago
    Analysis of nanopore detector measurements using Machine-Learning methods, with application to single-molecule kinetic analysis
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    Background: A nanopore detector has a nanometer-scale trans-membrane channel across which a potential difference is established, resulting in an ionic current through the channel ...
    Matthew Landry, Stephen Winters-Hilt
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    BMCBI
    2007
    207views more  BMCBI 2007»
    Analyzing in situ gene expression in the mouse brain with image registration, feature extraction and block clustering
    13 years 9 months ago
    Analyzing in situ gene expression in the mouse brain with image registration, feature extraction and block clustering
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    Background: Many important high throughput projects use in situ hybridization and may require the analysis of images of spatial cross sections of organisms taken with cellular lev...
    Manjunatha Jagalur, Chris Pal, Erik G. Learned-Mil...
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