Abstract: We examine a new approach to building decision tree by introducing a geometric splitting criterion, based on the properties of a family of metrics on the space of partiti...
We propose a new method to build persistent suffix trees for indexing the genomic data. Our algorithm DiGeST (Disk-Based Genomic Suffix Tree) improves significantly over previous ...
Marina Barsky, Ulrike Stege, Alex Thomo, Chris Upt...
Abstract— Application-layer multicast (ALM, or overlay multicast) has been proposed to overcome limitations in IP multicast. While much measurement work (such as delay or connect...
Background: Multiple sequence alignment is the foundation of many important applications in bioinformatics that aim at detecting functionally important regions, predicting protein...
Virpi Ahola, Tero Aittokallio, Mauno Vihinen, Esa ...
Background: It has repeatedly been shown that interacting protein families tend to have similar phylogenetic trees. These similarities can be used to predicting the mapping betwee...