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ALMOB
2008
131views more  ALMOB 2008»
13 years 8 months ago
Fast algorithms for computing sequence distances by exhaustive substring composition
The increasing throughput of sequencing raises growing needs for methods of sequence analysis and comparison on a genomic scale, notably, in connection with phylogenetic tree reco...
Alberto Apostolico, Olgert Denas
JACM
2006
99views more  JACM 2006»
13 years 8 months ago
Finding a maximum likelihood tree is hard
Abstract. Maximum likelihood (ML) is an increasingly popular optimality criterion for selecting evolutionary trees [Felsenstein 1981]. Finding optimal ML trees appears to be a very...
Benny Chor, Tamir Tuller
BMCBI
2004
196views more  BMCBI 2004»
13 years 8 months ago
MUSCLE: a multiple sequence alignment method with reduced time and space complexity
Background: In a previous paper, we introduced MUSCLE, a new program for creating multiple alignments of protein sequences, giving a brief summary of the algorithm and showing MUS...
Robert C. Edgar
AMAI
2008
Springer
13 years 8 months ago
The giving tree: constructing trees for efficient offline and online multi-robot coverage
This paper discusses the problem of building efficient coverage paths for a team of robots. An efficient multi-robot coverage algorithm should result in a coverage path for every ...
Noa Agmon, Noam Hazon, Gal A. Kaminka
CIKM
2004
Springer
14 years 10 days ago
InfoAnalyzer: a computer-aided tool for building enterprise taxonomies
In this paper we study the problem of collecting training samples for building enterprise taxonomies. We develop a computer-aided tool named InfoAnalyzer, which can effectively as...
Li Zhang, Shixia Liu, Yue Pan, Liping Yang