This paper describes SODA a novel ontology alignment method for the OWL-DL format. SODA uses a new approach that consists in computing local and semantic similarities among ontolog...
Sami Zghal, Sadok Ben Yahia, Engelbert Mephu Nguif...
Background: The mechanisms underlying protein function and associated conformational change are dominated by a series of local entropy fluctuations affecting the global structure ...
Computing large multiple protein sequence alignments using progressive alignment tools such as ClustalW requires several hours on state-of-the-art workstations. ClustalW uses a th...
Motivation: Remote homology detection between protein sequences is a central problem in computational biology. Supervised learning algorithms based on support vector machines are ...
Background: Protein remote homology detection is a central problem in computational biology. Most recent methods train support vector machines to discriminate between related and ...