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» A New Approach to Protein Structure Mining and Alignment
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EVOW
2004
Springer
14 years 7 days ago
Evolving Regular Expression-Based Sequence Classifiers for Protein Nuclear Localisation
A number of bioinformatics tools use regular expression (RE) matching to locate protein or DNA sequence motifs that have been discovered by researchers in the laboratory. For exam...
Amine Heddad, Markus Brameier, Robert M. MacCallum
CIKM
2009
Springer
14 years 3 months ago
MKEM: a multi-level knowledge emergence model for mining undiscovered public knowledge
Background: Since Swanson proposed the Undiscovered Public Knowledge (UPK) model, there have been many approaches to uncover UPK by mining the biomedical literature. These earlier...
Ali Zeeshan Ijaz, Min Song, Doheon Lee
BMCBI
2007
135views more  BMCBI 2007»
13 years 8 months ago
Sequence similarity is more relevant than species specificity in probabilistic backtranslation
Background: Backtranslation is the process of decoding a sequence of amino acids into the corresponding codons. All synthetic gene design systems include a backtranslation module....
Alfredo Ferro, Rosalba Giugno, Giuseppe Pigola, Al...
EUROPAR
2001
Springer
14 years 1 months ago
Experiments in Parallel Clustering with DBSCAN
We present a new result concerning the parallelisation of DBSCAN, a Data Mining algorithm for density-based spatial clustering. The overall structure of DBSCAN has been mapped to a...
Domenica Arlia, Massimo Coppola
ICDM
2008
IEEE
182views Data Mining» more  ICDM 2008»
14 years 2 months ago
Multiple-Instance Regression with Structured Data
We present a multiple-instance regression algorithm that models internal bag structure to identify the items most relevant to the bag labels. Multiple-instance regression (MIR) op...
Kiri L. Wagstaff, Terran Lane, Alex Roper